dc.contributor.author | ten Hoopen, Petra | |
dc.contributor.author | Cochrane, Guy | |
dc.date.accessioned | 2019-01-02T20:10:12Z | |
dc.date.available | 2019-01-02T20:10:12Z | |
dc.date.issued | 2016 | |
dc.identifier.citation | ten Hooppen, P.; Cochrane, G. and Micro B3 Consortium (2016) Ocean Day sampling handbook. Apri 2016. Marine Microbial Biodiversity, Bioinformatics and Biotechnology (Micro B3) Project, 85pp. DOI: http://dx.doi.org/10.25607/OBP-179 | en_US |
dc.identifier.uri | http://hdl.handle.net/11329/616 | |
dc.identifier.uri | http://dx.doi.org/10.25607/OBP-179 | |
dc.description.abstract | The Ocean Sampling Day (OSD) Handbook, version of April 2016, is a best practice guide
describing procedures and policies on the marine sample collection, logistics and
bioinformatics intended primarily for marine research stations and cruises contributing to
the Ocean Sampling Day event, (http://www.microb3.eu/osd). These guidelines on the OSD
sample and data collection and archiving were developed by the Micro B3 consortium to
support an objective of the Micro B3 project (http://www.microb3.eu/) to integrate global
marine data with research on microbial diversity and functions.
A collection of OSD samples acquired according to OSD Handbook guidelines, i.e. using
standardised protocols and accompanied by a standardised set of environmental
parameters, will enable molecular and morphological analysis of marine microbial
biodiversity on a global scale and in a rich environmental context. OSD samples will be
archived at the Smithsonian Institution National Museum of Natural History, USA, to allow
their availability as technologies advances. OSD sample metadata and environmental data
will be stored at the PANGAEA (http://www.pangaea.de), condensed summary of
oceanographic data in the SeaDataNet (http://www.seadatanet.org/) and morphologybased biodiversity data in the EurOBIS (http://www.eurobis.org/). OSD sample metadata
and sequence/read data will be archived at the ENA (http://www.ebi.ac.uk/ena/). The Micro
B3 Information System will provide a primary access to all OSD data. | en_US |
dc.description.sponsorship | EU | en_US |
dc.language.iso | en | en_US |
dc.publisher | Marine Microbial Biodiversity, Bioinformatics & Biotechnology (Micro B3) Project | en_US |
dc.subject.other | Microbial diversity | en_US |
dc.title | Ocean Day sampling handbook. April 2016. | en_US |
dc.type | Report | en_US |
dc.description.status | Published | en_US |
dc.format.pages | 85pp. | en_US |
dc.contributor.corpauthor | Micro B3 Consortium | en_US |
dc.description.notes | Contributors: Anna Kopf, Stephane Pesant,
Dick Schaap, Renzo Kottmann, Arianna Broggiato, Caroline von Kries, Tom
Dedeurwaerdere, Chris Bowler, Simon Claus, Dawn Field, Mesude Bicak, Frank Oliver
Gloeckner and participants of the Micro B3 Extended Executive Board Meeting, 23rd
-25th of April 2014, Bremen. | en_US |
dc.description.refereed | Refereed | en_US |
dc.subject.parameterDiscipline | Parameter Discipline::Biological oceanography::Bacteria and viruses | en_US |
dc.description.currentstatus | Current | en_US |
dc.description.sdg | 14.A | en_US |
dc.description.eov | Microbe biomass and diversity | en_US |
dc.description.bptype | Best Practice | en_US |
dc.description.bptype | Manual | en_US |
obps.contact.contactemail | osd-contact@microb3.eu | |
obps.resourceurl.publisher | http://www.assembleplus.eu/sites/assembleplus.eu/files/public/manual/OSD_HandbooK_2016.pdf | en_US |