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dc.contributor.authorKitahashi, Tomo
dc.contributor.authorWatanabe, Hiromi Kayama
dc.contributor.authorTsuchiya, Masashi
dc.contributor.authorYamamoto, Hideyuki
dc.contributor.authorYamamoto, Hiroyuki
dc.date.accessioned2023-06-06T16:46:03Z
dc.date.available2023-06-06T16:46:03Z
dc.date.issued2018
dc.identifier.citationKitahashi, T., Watanabe, H. K., Tsuchiya, M., Yamamoto, H., and Yamamoto, H. (2018) A new method for acquiring images of meiobenthic images using the FlowCAM. MethodsX, 5, pp.1330–1335. DOI: https://doi.org/10.1016/j.mex.2018.10.012en_US
dc.identifier.urihttps://repository.oceanbestpractices.org/handle/11329/2251
dc.description.abstractThe purpose of this study was to develop a new method for investigating sediment-inhabiting meiobenthos using the Flow Cytometer And Microscope (FlowCAM). Meiobenthos are widely recognized as a useful indicator for assessing the effects of anthropogenic and natural disturbances in both shallow and deep ocean ecosystems. These small benthic invertebrates are traditionally investigated by individually counting and identifying specimens under a microscope, which is labor intensive and time consuming. However, FlowCAM, which was originally developed to semiautomatically analyze microplankton, has the potential to resolve these challenges. Meiobenthic specimens were extracted from sediment using the centrifugal separation method and were then pipetted into the FlowCAM system and imaged. The images were then used to classify and count the specimens at high taxonomic levels to verify the effectiveness of this method compared with traditional methods. We found that FlowCAM system: • Enabled sufficient meiobenthic images to be obtained to allow the identification and classification of specimens at high taxonomic levels. • Obtained comparable numbers of individuals to traditional methods. • Has the potential to rapidly process large the volumes of meiobenthos samples that are required when monitoring seasonal and spatial variation in ocean ecosystems and conducting long-term environmental impact assessments.en_US
dc.language.isoenen_US
dc.rightsAttribution 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/*
dc.subject.otherEnvironmental monitoringen_US
dc.subject.otherMeiobenthosen_US
dc.subject.otherBenthic invertebratesen_US
dc.subject.otherFlowCAMen_US
dc.subject.otherSeasonal variationen_US
dc.titleA new method for acquiring images of meiobenthic images using the FlowCAM.en_US
dc.typeJournal Contributionen_US
dc.description.refereedRefereeden_US
dc.format.pagerangepp.1330–1335en_US
dc.identifier.doihttps://doi.org/10.1016/j.mex.2018.10.012
dc.subject.parameterDisciplineRock and sediment biotaen_US
dc.subject.instrumentTypeflow cytometersen_US
dc.subject.dmProcessesData analysisen_US
dc.subject.dmProcessesData aggregationen_US
dc.subject.dmProcessesData acquisitionen_US
dc.bibliographicCitation.titleMethodsXen_US
dc.bibliographicCitation.volume5en_US
dc.bibliographicCitation.issue12en_US
dc.description.sdg14.aen_US
dc.description.maturitylevelConcepten_US
dc.description.adoptionNovel (no adoption outside originators)en_US
dc.description.sensorsFlow Cytometer And Microscope (FlowCAM)en_US
dc.description.methodologyTypeMethoden_US
obps.contact.contactnameTomo Kitahashi
obps.contact.contactemailtkitahashi@jamstec.go.jp
obps.resourceurl.publisherhttps://www.sciencedirect.com/science/article/pii/S2215016118301699#se0155


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Attribution 4.0 International
Except where otherwise noted, this item's license is described as Attribution 4.0 International