Now showing items 5-12 of 12

    • Environmental DNA protocol development guide for biomonitoring. 

      De Brauwer, M.; Chariton, A.; Clarke, L.J.; Cooper, M.K.; DiBattista, J.; Furlan, E.; Giblot-Ducray, D.; Gleeson, D.; Harford, A.; Herbert, S.; MacDonald, A.J.; Miller, A.; Montgomery, K.; Mooney, T.; Noble, L.M.; Rourke, M.; Sherman, C.D.H.; Stat, M.; Suter, L.; West, K.M.; White, N.; Villacorta-Rath, C.; Zaiko, A.; Trujillo-Gonzalez, A. (National eDNA Reference Centre, Canberra, Australia, 2022)
      The Environmental DNA protocol development guide for biomonitoring (EP guide for biomonitoring) provides harmonised quality control and minimum standard operating procedures. This document is complemented by the Environmental ...
    • Environmental DNA test validation guidelines. 

      De Brauwer, M.; Chariton, A.; Clarke, L.J.; Cooper, M.K.; DiBattista, J.; Furlan, E.; Giblot-Ducray, D.; Gleeson, D.; Harford, A.; Herbert, S.; MacDonald, A.J.; Miller, A.; Montgomery, K.; Mooney, T.; Noble, L.M.; Rourke, M.; Sherman, C.D.H.; Stat, M.; Suter, L.; West, K.M.; White, N.; Villacorta-Rath, C.; Zaiko, A.; Trujillo-Gonzalez, A. (National eDNA Reference Centre, Canberra, Australia, 2022)
      These Environmental DNA test validation guidelines provide harmonised quality control and minimum standard considerations for developing or validating eDNA/eRNA assays for the purpose of single-species or multi-species ...
    • Framing Cutting-Edge Integrative Deep-Sea Biodiversity Monitoring via Environmental DNA and Optoacoustic Augmented Infrastructures. 

      Stefanni, S.; Mirimin, L.; Stankovic, D.; Chatzievangelou, D.; Bongiorni, L.; Marini, S.; Modica, M.V.; Manea, E.; Bonofiglio, F.; del Rio Fernandez, J.; Cukrov, N.; Gavrilovic, A.; De Leo, F.C.; Aguzzi, J. (2022)
      Deep-sea ecosystems are reservoirs of biodiversity that are largely unexplored, but their exploration and biodiscovery are becoming a reality thanks to biotechnological advances (e.g., omics technologies) and their ...
    • Interoperable vocabulary for marine microbial flow cytometry. 

      Thyssen, Melilotus; Gregori, Gerald; Creach, Veronique; Lahbib, Soumaya; Dugenne, Mathilde; Aardema, Hedy M.; Artigas, Luis-Felipe; Huang, Bangqin; Barani, Aude; Beaugeard, Laureen; Bellaaj-Zouari, Amel; Beran, Alfred; Casotti, Raffaella; Del Amo, Yolanda; Denis, Michel; Dubelaar, George B.J.; Endres, Sonja; Haraguchi, Lumi; Karlson, Bengt; Lambert, Christophe; Louchart, Arnaud; Marie, Dominique; Moncoiffe, Gwenaëlle; Pecqueur, David; Ribalet, Francoise; Rijkeboer, Machteld; Silovic, Tina; Silva, Ricardo; Marro, Sophie; Sosik, Heidi M.; Sourisseau, Marc; Tarran, Glen; Van Oostende, Nicolas; Zhao, Li; Zheng, Shan (2022)
      The recent development of biological sensors has extended marine plankton studies from conducting laboratory bench work to in vivo and real-time observations. Flow cytometry (FCM) has shed new light on marine microorganisms ...
    • Marine microbiomes: Towards standard methods and best practices. 

      Pesant, Stéphane; Goodwin, Kelly D.; Magalhães, Catarina; Lacoursière-Roussel, Anaïs (Frontiers Media SA, Lausanne, Switzerland, 2023)
      The microbiome is key to understanding and sustaining the services that ocean ecosystems provide (Bolhuis et al., 2020). The marine microbiome—an ensemble of microscopic organisms that inhabit water columns, sediments, ...
    • Omics community protocols. EuroSea Deliverable D3.19. 

      ludicone, Daniele; Montresor, Marina; Casotti, Raffaella; Campese, Lucia; Trano, Anna Chiara (EuroSea Project, , 2023)
      The aim of the WP3 “Network Integration and Improvements” is to coordinate and enhance key aspects of integration of European observing technology (and related data flows) for its use in the context of international ocean ...
    • A practical guide to DNA-based methods for biodiversity assessment. 

      Bruce, Kat; Blackman, Rosetta C.; Bourlat, Sarah J.; Hellström, Micaela; Bakker, Judith; Bista, Iliana; Bohmann, Kristine; Bouchez, Agnès; Brys, Rein; Clark, Katie; Elbrecht, Vasco; Fazi, Stefano; Fonseca, Vera G.; Hänfling, Bernd; Leese, Florian; Mächler, Elvira; Mahon, Andrew R.; Meissner, Kristian; Panksep, Kristel; Pawlowski, Jan; Schmidt Yáñez, Paul Luis; Seymour, Mathew; Thalinger, Bettina; Valentini, Alice; Woodcock, Paul; Traugott, Michael; Vasselon, Valentin; Deiner, Kristy (Pensoft Advanced Books, Sofia, Bulgaria, 2021)
      This book represents a synthesis of knowledge and best practice in the field of DNA-based biomonitoring at the time of writing. It has been written with end-users of molecular tools in mind, as well as those who are new ...
    • Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and Research 

      Samuel, Robyn; Meyer, Raïssa; Buttigieg, Pier Luigi; Davies, Neil; Jeffery, Nicholas W.; Samuel, Robyn; Pavloudi, Christina; Pitz, Kathleen Johnson; Sweetlove, Maxime; Theroux, Susanna; van de Kamp, Jodie; Watts, Alison (2021)
      Biomolecular ocean observing and research is a rapidly evolving field that uses omics approaches to describe biodiversity at its foundational level, giving insight into the structure and function of marine ecosystems over ...