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dc.contributor.authorPonsero, Alise J.
dc.contributor.authorBomhoff, Matthew
dc.contributor.authorBlumberg, Kai
dc.contributor.authorYouens-Clark, Ken
dc.contributor.authorHerz, Nina M.
dc.contributor.authorWood-Charlson, Elisha M.
dc.contributor.authorDelong, Edward F.
dc.contributor.authorHurwitz, Bonnie L.
dc.identifier.citationPonsero, A.J.; Bomhoff, M.; Blumberg, K.; Youens-Clark,K.; Herz, N.M. et al (2020) Planet Microbe: a platform for marine microbiology to discover and analyze interconnected ‘omics and environmental data. Nucleic Acids Research,1: gkaa637, 11pp. DOI:
dc.description.abstractIn recent years, large-scale oceanic sequencing efforts have provided a deeper understanding of marine microbial communities and their dynamics. These research endeavors require the acquisition of complex and varied datasets through large, interdisciplinary and collaborative efforts. However, no unifying framework currently exists for the marine science community to integrate sequencing data with physical, geological, and geochemical datasets. Planet Microbe is a web-based platform that enables data discovery from curated historical and ongoing oceanographic sequencing efforts. In Planet Microbe, each ‘omics sample is linked with other biological and physiochemical measurements collected for the same water samples or during the same sample collection event, to provide a broader environmental context. This work highlights the need for curated aggregation efforts that can enable new insights into high-quality metagenomic datasets. Planet Microbe is freely accessible fromhttps://www.
dc.rightsAttribution 4.0 International*
dc.titlePlanet Microbe: a platform for marine microbiology to discover and analyze interconnected ‘omics and environmental data.en_US
dc.typeJournal Contributionen_US
dc.subject.parameterDisciplineParameter Discipline::Biological oceanography::Bacteria and virusesen_US
dc.subject.dmProcessesData Management Practices::Data aggregationen_US
dc.subject.dmProcessesData Management Practices::Data archival/stewardship/curationen_US
dc.bibliographicCitation.titleNucleic Acids Researchen_US
dc.bibliographicCitation.issueArticle gkaa637en_US
dc.description.maturitylevelTRL 9 Actual system "mission proven" through successful mission operations (ground or space)en_US
dc.description.bptypeBest Practiceen_US
dc.description.bptypeManual (incl. handbook, guide, cookbook etc)en_US

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Attribution 4.0 International
Except where otherwise noted, this item's license is described as Attribution 4.0 International